What are the potential issues with starting JavaScript via PHP in a web development project?

One potential issue with starting JavaScript via PHP in a web development project is that it can lead to a mix of server-side and client-side logic, making the code harder to maintain and debug. To solve this issue, it's recommended to separate the PHP and JavaScript code as much as possible, keeping server-side logic in PHP files and client-side logic in JavaScript files.

```php
// Separate PHP and JavaScript code
// PHP file
<?php
// Server-side logic
?>

<!DOCTYPE html>
<html>
<head>
    <title>My Webpage</title>
    <script src="script.js"></script>
</head>
<body>
    <h1>Hello World!</h1>
</body>
</html>
```

In the example above, the PHP code is kept separate from the HTML and JavaScript code, making it easier to maintain and debug each part of the code separately.